One for between

The is a simple example how to read directly from a list file and check if that variable exists as directory.
If that is true, if writes to the tasklist, if not, it writes to another list.

Since one can pass multiple arguments to touch, one can even use parameter expansion to create multiple files at once.

#!/bin/bash
DATA="$HOME/data"
LIST="$DATA/mylist.txt"
JOB_NO="$DATA/job_no.txt"
JOB_YES="$DATA/job_yes.txt"

[ -d "$DATA" ] || mkdir -p "$DATA"
touch $JOB_{NO,YES} $LIST

while read dirfolder
do    [ -d "$dirfolder" ] && \
    echo "$dirfolder" >> "$JOB_YES" || \
    echo "$dirfolder" >> "$JOB_NO"
done<"$LIST"

Have fun